Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein
Gene families : OG_01_0007857 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007857_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g36210.1 | |
Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g36210.1 | |
Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_355 | |
Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_87 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | ISM | GOs from InterProScan |
MF | GO:0010333 | terpene synthase activity | ISM | GOs from InterProScan |
MF | GO:0016829 | lyase activity | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR008949 | Isoprenoid_synthase_dom_sf | Gene3D | 531 | 800 |
IPR008930 | Terpenoid_cyclase/PrenylTrfase | SUPERFAMILY | 105 | 288 |
IPR008949 | Isoprenoid_synthase_dom_sf | SUPERFAMILY | 515 | 673 |
IPR005630 | Terpene_synthase_metal-bd | Pfam | 520 | 671 |
IPR001906 | Terpene_synth_N | Pfam | 269 | 476 |
IPR036965 | Terpene_synth_N_sf | Gene3D | 91 | 527 |
IPR008930 | Terpenoid_cyclase/PrenylTrfase | SUPERFAMILY | 281 | 500 |
No CAZYmes available for this sequence
No external refs found! |