LOC_Os02g38470.1

Description : AP2/B3-like transcriptional factor family protein

Gene families : OG_01_0014003 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014003_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g38470.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g38470.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_25

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003340	B3_DNA-bd	Pfam	965	1044
IPR003340	B3_DNA-bd	Pfam	387	464
IPR003340	B3_DNA-bd	SMART	955	1047
IPR003340	B3_DNA-bd	SMART	378	468
IPR003340	B3_DNA-bd	CDD	390	465
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	377	470
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	947	1048
IPR003340	B3_DNA-bd	ProSiteProfiles	375	468
IPR044837	REM16-like	PANTHER	232	645
IPR003340	B3_DNA-bd	CDD	961	1047
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	956	1047
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	370	470
IPR003340	B3_DNA-bd	ProSiteProfiles	986	1048

No CAZYmes available for this sequence

External Links

No external refs found!