1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g39060.1

LOC_Os02g39060.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0033357 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0033357_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g39060.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g39060.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_160
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_29


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 83 183
IPR000504 RRM_dom SMART 192 264
IPR000504 RRM_dom SMART 105 180
IPR000504 RRM_dom ProSiteProfiles 191 274
IPR000504 RRM_dom Pfam 193 261
IPR000504 RRM_dom Pfam 106 163
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 2 185
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 186 281
IPR000504 RRM_dom ProSiteProfiles 104 184
IPR035979 RBD_domain_sf SUPERFAMILY 187 268

No CAZYmes available for this sequence

No external refs found!