LOC_Os02g39350.1

Description : Eukaryotic translation initiation factor eIF2A family protein

Gene families : OG_01_0005057 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005057_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g39350.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g39350.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_295
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_110

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011387	TIF2A	PANTHER	8	519
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	21	186
IPR011387	TIF2A	PIRSF	2	521
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	221	428
IPR013979	TIF_beta_prop-like	Pfam	216	409

No CAZYmes available for this sequence

External Links

No external refs found!