LOC_Os02g39550.1

Description : LETM1-like protein

Gene families : OG_01_0000393 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000393_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g39550.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g39550.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_224

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005743	mitochondrial inner membrane	ISM	GOs from InterProScan
CC	GO:0016020	membrane	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044202	LETM1/MDM38-like	PANTHER	1	765
IPR033122	LETM1-like_RBD	ProSiteProfiles	309	512
IPR002048	EF_hand_dom	ProSiteProfiles	687	722
IPR002048	EF_hand_dom	ProSiteProfiles	723	758
IPR011992	EF-hand-dom_pair	SUPERFAMILY	696	755

No CAZYmes available for this sequence

External Links

No external refs found!