LOC_Os02g39950.1

Description : calcium-binding EF hand family protein

Gene families : OG_01_0000412 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000412_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g39950.1	No neighbors in network
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g39950.1
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_10

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006816	calcium ion transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006851	mitochondrial calcium ion transmembrane transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0070588	calcium ion transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR039800	MICU1/2/3	PANTHER	9	460
IPR002048	EF_hand_dom	Pfam	210	234
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	410	422
IPR002048	EF_hand_dom	ProSiteProfiles	397	432
IPR002048	EF_hand_dom	SMART	207	235
IPR002048	EF_hand_dom	SMART	173	201
IPR002048	EF_hand_dom	SMART	401	429
IPR002048	EF_hand_dom	ProSiteProfiles	203	238
IPR011992	EF-hand-dom_pair	SUPERFAMILY	176	428
IPR002048	EF_hand_dom	CDD	176	233
IPR002048	EF_hand_dom	Pfam	178	199
IPR002048	EF_hand_dom	Pfam	378	429
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	216	228

No CAZYmes available for this sequence

External Links

No external refs found!