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  5. LOC_Os02g39970.1

LOC_Os02g39970.1


Description : Leucine-rich repeat family protein


Gene families : OG_01_0001347 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001347_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g39970.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g39970.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_180


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001611 Leu-rich_rpt Pfam 136 154
IPR001611 Leu-rich_rpt Pfam 234 255
IPR001611 Leu-rich_rpt Pfam 380 400
IPR001611 Leu-rich_rpt Pfam 356 375
IPR001611 Leu-rich_rpt Pfam 403 424
IPR001611 Leu-rich_rpt Pfam 331 346
IPR032675 LRR_dom_sf Gene3D 251 377
IPR032675 LRR_dom_sf Gene3D 378 579
IPR001611 Leu-rich_rpt ProSiteProfiles 332 352
IPR032675 LRR_dom_sf Gene3D 174 250
IPR032675 LRR_dom_sf Gene3D 23 173
IPR001611 Leu-rich_rpt Pfam 259 318
IPR001611 Leu-rich_rpt Pfam 476 535
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 402 426
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 259 282
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 233 258
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 135 159
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 498 523
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 354 378
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 184 209
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 427 450

No CAZYmes available for this sequence

No external refs found!