1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g42210.1

LOC_Os02g42210.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0011713 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011713_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g42210.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g42210.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_328
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_229


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 210 244
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 175 209
IPR011990 TPR-like_helical_dom_sf Gene3D 17 252
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 280 314
IPR002885 Pentatricopeptide_rpt Pfam 212 251
IPR002885 Pentatricopeptide_rpt Pfam 279 327
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 315 349
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 245 279
IPR002885 Pentatricopeptide_rpt TIGRFAM 282 315
IPR002885 Pentatricopeptide_rpt TIGRFAM 248 281
IPR002885 Pentatricopeptide_rpt TIGRFAM 213 245
IPR002885 Pentatricopeptide_rpt TIGRFAM 178 210
IPR002885 Pentatricopeptide_rpt Pfam 353 380
IPR002885 Pentatricopeptide_rpt Pfam 178 207
IPR011990 TPR-like_helical_dom_sf Gene3D 253 411

No CAZYmes available for this sequence

No external refs found!