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  5. LOC_Os02g44108.1

LOC_Os02g44108.1


Description : expansin B4


Gene families : OG_01_0004607 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004607_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g44108.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g44108.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_289
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_181


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005795 LolPI PRINTS 243 260
IPR005795 LolPI PRINTS 142 157
IPR005795 LolPI PRINTS 102 113
IPR005795 LolPI PRINTS 196 211
IPR005795 LolPI PRINTS 263 280
IPR005795 LolPI PRINTS 212 227
IPR005795 LolPI PRINTS 164 179
IPR036908 RlpA-like_sf SUPERFAMILY 57 211
IPR007117 Expansin_CBD ProSiteProfiles 205 287
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 82 192
IPR036749 Expansin_CBD_sf SUPERFAMILY 193 287
IPR036749 Expansin_CBD_sf Gene3D 191 290
IPR009009 RlpA-like_DPBB Pfam 101 182
IPR036908 RlpA-like_sf Gene3D 49 188
IPR007117 Expansin_CBD Pfam 194 276
IPR007112 Expansin/allergen_DPBB_dom SMART 100 182
IPR007118 Expan_Lol_pI PRINTS 63 78
IPR007118 Expan_Lol_pI PRINTS 175 191
IPR007118 Expan_Lol_pI PRINTS 273 287
IPR007118 Expan_Lol_pI PRINTS 104 122
IPR007118 Expan_Lol_pI PRINTS 81 99
IPR007118 Expan_Lol_pI PRINTS 232 246

No CAZYmes available for this sequence

No external refs found!