LOC_Os02g44130.1

Description : C2H2-like zinc finger protein

Gene families : OG_01_0016345 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016345_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g44130.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g44130.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_240
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_122

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	ProSitePatterns	264	284
IPR013087	Znf_C2H2_type	ProSitePatterns	6	26
IPR036236	Znf_C2H2_sf	SUPERFAMILY	198	284
IPR013087	Znf_C2H2_type	ProSiteProfiles	262	284
IPR013087	Znf_C2H2_type	ProSiteProfiles	198	220
IPR044303	ZAT1/4/9	PANTHER	1	338
IPR013087	Znf_C2H2_type	ProSiteProfiles	4	27
IPR013087	Znf_C2H2_type	SMART	198	220
IPR013087	Znf_C2H2_type	SMART	4	26
IPR013087	Znf_C2H2_type	SMART	262	284
IPR013087	Znf_C2H2_type	ProSitePatterns	200	220

No CAZYmes available for this sequence

External Links

No external refs found!