LOC_Os02g47590.1

Description : ornithine carbamoyltransferase

Gene families : OG_01_0010310 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010310_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g47590.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g47590.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_214

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004585	ornithine carbamoyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	ISM	GOs from InterProScan
BP	GO:0006591	ornithine metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016597	amino acid binding	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006131	Asp_carbamoyltransf_Asp/Orn-bd	Pfam	214	363
IPR036901	Asp/Orn_carbamoylTrfase_sf	Gene3D	197	352
IPR036901	Asp/Orn_carbamoylTrfase_sf	Gene3D	68	361
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	112	131
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	330	353
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	194	205
IPR006130	Asp/Orn_carbamoylTrfase	PRINTS	318	327
IPR024904	OTCase_ArgI	Hamap	65	366
IPR006132	Asp/Orn_carbamoyltranf_P-bd	Pfam	66	207
IPR002292	Orn/put_carbamltrans	PRINTS	344	355
IPR002292	Orn/put_carbamltrans	PRINTS	282	292
IPR002292	Orn/put_carbamltrans	PRINTS	143	156
IPR002292	Orn/put_carbamltrans	PRINTS	183	197
IPR002292	Orn/put_carbamltrans	PRINTS	110	124
IPR002292	Orn/put_carbamltrans	TIGRFAM	66	365
IPR036901	Asp/Orn_carbamoylTrfase_sf	SUPERFAMILY	64	366

No CAZYmes available for this sequence

External Links

No external refs found!