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  5. LOC_Os02g48100.1

LOC_Os02g48100.1


Description : DEAD/DEAH box RNA helicase family protein


Gene families : OG_01_0010820 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010820_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g48100.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g48100.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_39


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase SUPERFAMILY 7 318
IPR001650 Helicase_C ProSiteProfiles 186 341
IPR027417 P-loop_NTPase Gene3D 173 343
IPR027417 P-loop_NTPase Gene3D 1 170
IPR001650 Helicase_C SMART 222 305
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 7 147
IPR045562 RecG_dom3_C Pfam 330 387
IPR014001 Helicase_ATP-bd ProSiteProfiles 1 162
IPR001650 Helicase_C Pfam 195 304

No CAZYmes available for this sequence

No external refs found!