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  5. LOC_Os02g48122.1

LOC_Os02g48122.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0008303 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008303_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g48122.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g48122.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 390 424
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 355 389
IPR002885 Pentatricopeptide_rpt Pfam 212 237
IPR002885 Pentatricopeptide_rpt Pfam 358 385
IPR002885 Pentatricopeptide_rpt Pfam 178 194
IPR011990 TPR-like_helical_dom_sf Gene3D 50 240
IPR011990 TPR-like_helical_dom_sf Gene3D 241 488
IPR002885 Pentatricopeptide_rpt TIGRFAM 358 387
IPR002885 Pentatricopeptide_rpt TIGRFAM 212 238

No CAZYmes available for this sequence

No external refs found!