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  5. LOC_Os02g52470.2

LOC_Os02g52470.2


Description : repressor of lrx1


Gene families : OG_01_0003611 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003611_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g52470.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g52470.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_323
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_113


Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding ISM GOs from InterProScan
BP GO:0002098 tRNA wobble uridine modification ISM GOs from InterProScan
BP GO:0008033 tRNA processing ISM GOs from InterProScan
BP GO:0034227 tRNA thio-modification ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032442 CTU1_C Pfam 295 325
IPR000541 Ncs6/Tuc1/Ctu1 TIGRFAM 217 316
IPR000541 Ncs6/Tuc1/Ctu1 Hamap 18 330
IPR011063 TilS/TtcA_N Pfam 68 255
IPR014729 Rossmann-like_a/b/a_fold Gene3D 19 332
IPR035107 tRNA_thiolation_TtcA_Ctu1 PIRSF 16 327
IPR000541 Ncs6/Tuc1/Ctu1 PANTHER 19 345

No CAZYmes available for this sequence

No external refs found!