LOC_Os02g53270.1

No description available

Gene families : OG_01_0001882 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001882_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g53270.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g53270.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_304
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	Gene3D	965	1158
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	274	495
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	968	1113
IPR013633	NRDE-2	Pfam	293	686
IPR011990	TPR-like_helical_dom_sf	Gene3D	279	625
IPR003107	HAT	SMART	288	320
IPR003107	HAT	SMART	1096	1128
IPR003107	HAT	SMART	333	366
IPR003107	HAT	SMART	826	866
IPR003107	HAT	SMART	367	399
IPR003107	HAT	SMART	1059	1093
IPR013633	NRDE-2	PANTHER	37	1155

No CAZYmes available for this sequence

External Links

No external refs found!