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  5. LOC_Os02g54540.1

LOC_Os02g54540.1


Description : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein


Gene families : OG_01_0001106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001106_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g54540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g54540.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_211


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035940 CAP_sf Gene3D 34 172
IPR001283 CRISP-related PRINTS 127 143
IPR001283 CRISP-related PRINTS 104 117
IPR001283 CRISP-related PRINTS 155 168
IPR001283 CRISP-related PRINTS 57 75
IPR035940 CAP_sf SUPERFAMILY 36 172
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 128 138
IPR014044 CAP_domain Pfam 44 160
IPR001283 CRISP-related PANTHER 1 172
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 155 166
IPR014044 CAP_domain SMART 36 168

No CAZYmes available for this sequence

No external refs found!