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  5. LOC_Os02g54820.1

LOC_Os02g54820.1


Description : trehalose-phosphatase/synthase 9


Gene families : OG_01_0009376 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009376_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g54820.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g54820.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_140


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0005992 trehalose biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001830 Glyco_trans_20 CDD 50 531
IPR006379 HAD-SF_hydro_IIB TIGRFAM 579 780
IPR003337 Trehalose_PPase TIGRFAM 577 827
IPR036412 HAD-like_sf SUPERFAMILY 578 827
IPR023214 HAD_sf Gene3D 577 705
IPR023214 HAD_sf Gene3D 707 835
IPR001830 Glyco_trans_20 Pfam 50 531
IPR003337 Trehalose_PPase Pfam 581 815
IPR001830 Glyco_trans_20 PANTHER 1 832
HMM Family HMM Length Query Length e-Value Query Start Query End
GT20 475 887 1.5e-162 49 532
No external refs found!