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  5. LOC_Os02g55270.1

LOC_Os02g55270.1


Description : C-terminal domain phosphatase-like 4


Gene families : OG_01_0000716 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000716_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g55270.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g55270.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_177
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_234


Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity ISM GOs from InterProScan
BP GO:0070940 obsolete dephosphorylation of RNA polymerase II C-terminal domain ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004274 FCP1_dom ProSiteProfiles 102 278
IPR001357 BRCT_dom ProSiteProfiles 322 399
IPR011947 FCP1_euk TIGRFAM 101 260
IPR001357 BRCT_dom Pfam 325 399
IPR023214 HAD_sf Gene3D 94 325
IPR036412 HAD-like_sf SUPERFAMILY 99 278
IPR036420 BRCT_dom_sf SUPERFAMILY 326 416
IPR004274 FCP1_dom Pfam 108 259
IPR036420 BRCT_dom_sf Gene3D 326 416
IPR001357 BRCT_dom SMART 324 406
IPR004274 FCP1_dom SMART 105 264
IPR039189 Fcp1 PANTHER 41 418

No CAZYmes available for this sequence

No external refs found!