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  5. LOC_Os02g55280.1

LOC_Os02g55280.1


Description : C-terminal domain phosphatase-like 4


Gene families : OG_01_0037261 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0037261_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g55280.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65


Type GO Term Name Evidence Source
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity ISM GOs from InterProScan
BP GO:0070940 obsolete dephosphorylation of RNA polymerase II C-terminal domain ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001357 BRCT_dom SMART 241 318
IPR039189 Fcp1 PANTHER 65 101
IPR001357 BRCT_dom Pfam 254 310
IPR036412 HAD-like_sf SUPERFAMILY 70 182
IPR023214 HAD_sf Gene3D 99 238
IPR023214 HAD_sf Gene3D 65 98
IPR036420 BRCT_dom_sf Gene3D 239 329
IPR001357 BRCT_dom ProSiteProfiles 239 311
IPR039189 Fcp1 PANTHER 99 328
IPR004274 FCP1_dom Pfam 98 178
IPR004274 FCP1_dom SMART 76 183
IPR036420 BRCT_dom_sf SUPERFAMILY 243 328

No CAZYmes available for this sequence

No external refs found!