LOC_Os02g55340.1

Description : protein kinase family protein / WD-40 repeat family protein

Gene families : OG_01_0007134 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007134_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g55340.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g55340.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_356
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_186

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0004674	protein serine/threonine kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006914	autophagy	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016236	macroautophagy	ISM	GOs from InterProScan
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0045324	late endosome to vacuole transport	ISM	GOs from InterProScan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	675	890
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1120	1276
IPR021133	HEAT_type_2	ProSiteProfiles	746	784
IPR000719	Prot_kinase_dom	Pfam	71	332
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1063	1119
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	1075	1486
IPR021133	HEAT_type_2	ProSiteProfiles	580	617
IPR001680	WD40_rpt	ProSiteProfiles	1475	1488
IPR011989	ARM-like	Gene3D	505	674
IPR000719	Prot_kinase_dom	SMART	27	343
IPR001680	WD40_rpt	SMART	1071	1110
IPR001680	WD40_rpt	SMART	1219	1260
IPR001680	WD40_rpt	SMART	1443	1488
IPR001680	WD40_rpt	SMART	1121	1158
IPR001680	WD40_rpt	SMART	1359	1393
IPR001680	WD40_rpt	ProSiteProfiles	1078	1112
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	25	332
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	1280	1488
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	146	158
IPR001680	WD40_rpt	Pfam	1074	1110
IPR000357	HEAT	Pfam	580	605
IPR016024	ARM-type_fold	SUPERFAMILY	539	878
IPR000719	Prot_kinase_dom	ProSiteProfiles	27	351
IPR045162	Vps15-like	PANTHER	302	1488
IPR045162	Vps15-like	PANTHER	1	265

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os02g55340.1

Expression Profile

Co-expression Networks

Functional Annotation