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  5. LOC_Os02g57010.1

LOC_Os02g57010.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0011484 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011484_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g57010.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g57010.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_12


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 229 315
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 82 229
IPR000504 RRM_dom SMART 146 219
IPR000504 RRM_dom SMART 237 310
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 230 316
IPR000504 RRM_dom ProSiteProfiles 145 223
IPR000504 RRM_dom ProSiteProfiles 236 314
IPR035979 RBD_domain_sf SUPERFAMILY 145 228
IPR000504 RRM_dom Pfam 238 308
IPR000504 RRM_dom Pfam 147 216

No CAZYmes available for this sequence

No external refs found!