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  5. LOC_Os02g57470.1

LOC_Os02g57470.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0014267 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014267_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g57470.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g57470.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_350
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_188


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 138 363
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 204 317
IPR019734 TPR_repeat ProSiteProfiles 247 280
IPR019734 TPR_repeat ProSiteProfiles 410 443
IPR019734 TPR_repeat Pfam 536 562
IPR011990 TPR-like_helical_dom_sf Gene3D 364 593
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 407 556
IPR019734 TPR_repeat SMART 451 484
IPR019734 TPR_repeat SMART 410 443
IPR019734 TPR_repeat SMART 205 238
IPR019734 TPR_repeat SMART 146 179
IPR019734 TPR_repeat SMART 247 280
IPR019734 TPR_repeat SMART 493 526
IPR019734 TPR_repeat SMART 535 568

No CAZYmes available for this sequence

No external refs found!