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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0190613 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os02g58620.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os02g58620.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_162 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_131 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0015297 | antiporter activity | ISM | GOs from InterProScan |
| CC | GO:0016020 | membrane | ISM | GOs from InterProScan |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | ISM | GOs from InterProScan |
| BP | GO:0055085 | transmembrane transport | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 363 | 397 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 368 | 394 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 396 | 429 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 498 | 526 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 196 | 224 |
| IPR044644 | DinF-like | PANTHER | 1025 | 1097 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 352 | 452 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 248 | 351 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 155 | 247 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 495 | 529 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 469 | 680 |
| IPR044644 | DinF-like | PANTHER | 37 | 1024 |
| IPR002528 | MATE_fam | Pfam | 699 | 866 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 297 | 319 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 396 | 422 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 368 | 395 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 196 | 224 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 498 | 526 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 167 | 193 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 193 | 227 |
No CAZYmes available for this sequence
| No external refs found! |