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  5. Sevir.4G119700.1

Sevir.4G119700.1


Description : Translation elongation factor EFG/EF2 protein


Gene families : OG_01_0001396 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001396_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G119700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G119700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_133


Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISM GOs from InterProScan
MF GO:0003924 GTPase activity ISM GOs from InterProScan
MF GO:0005525 GTP binding ISM GOs from InterProScan
BP GO:0006414 translational elongation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004161 EFTu-like_2 Pfam 381 447
IPR004540 Transl_elong_EFG/EF2 Hamap 63 749
IPR000795 T_Tr_GTP-bd_dom PRINTS 118 126
IPR000795 T_Tr_GTP-bd_dom PRINTS 190 199
IPR000795 T_Tr_GTP-bd_dom PRINTS 154 165
IPR000795 T_Tr_GTP-bd_dom PRINTS 138 148
IPR000795 T_Tr_GTP-bd_dom PRINTS 69 82
IPR005517 Transl_elong_EFG/EF2_IV Pfam 535 655
IPR014721 Ribsml_uS5_D2-typ_fold_subgr Gene3D 541 745
IPR005517 Transl_elong_EFG/EF2_IV SMART 536 656
IPR005225 Small_GTP-bd_dom TIGRFAM 67 239
IPR035647 EFG_III/V SUPERFAMILY 458 535
IPR031157 G_TR_CS ProSitePatterns 111 126
IPR005517 Transl_elong_EFG/EF2_IV CDD 539 656
IPR009022 EFG_III CDD 461 536
IPR000795 T_Tr_GTP-bd_dom ProSiteProfiles 65 343
IPR041095 EFG_II Pfam 460 534
IPR027417 P-loop_NTPase Gene3D 57 344
IPR000795 T_Tr_GTP-bd_dom Pfam 66 339
IPR035647 EFG_III/V SUPERFAMILY 661 753
IPR000640 EFG_V-like Pfam 659 744
IPR027417 P-loop_NTPase SUPERFAMILY 64 339
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 535 657
IPR004540 Transl_elong_EFG/EF2 TIGRFAM 63 748
IPR009000 Transl_B-barrel_sf SUPERFAMILY 306 458
IPR000640 EFG_V-like SMART 658 745

No CAZYmes available for this sequence

No external refs found!