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  5. LOC_Os03g01270.1

LOC_Os03g01270.1


Description : expansin B2


Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g01270.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g01270.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_190
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_200


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007118 Expan_Lol_pI PRINTS 201 217
IPR007118 Expan_Lol_pI PRINTS 91 106
IPR007118 Expan_Lol_pI PRINTS 308 322
IPR007118 Expan_Lol_pI PRINTS 111 129
IPR007118 Expan_Lol_pI PRINTS 133 151
IPR007117 Expansin_CBD ProSiteProfiles 231 322
IPR036749 Expansin_CBD_sf Gene3D 215 326
IPR009009 RlpA-like_DPBB Pfam 129 208
IPR005795 LolPI PRINTS 190 205
IPR005795 LolPI PRINTS 168 183
IPR005795 LolPI PRINTS 131 142
IPR005795 LolPI PRINTS 238 253
IPR005795 LolPI PRINTS 151 161
IPR005795 LolPI PRINTS 222 237
IPR036908 RlpA-like_sf Gene3D 78 214
IPR036908 RlpA-like_sf SUPERFAMILY 90 217
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 112 218
IPR036749 Expansin_CBD_sf SUPERFAMILY 219 322
IPR007112 Expansin/allergen_DPBB_dom SMART 129 208
IPR007117 Expansin_CBD Pfam 220 311

No CAZYmes available for this sequence

No external refs found!