LOC_Os03g01540.1

Description : AT-hook motif nuclear-localized protein 1

Gene families : OG_01_0007073 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007073_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g01540.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g01540.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19

Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005175	PPC_dom	ProSiteProfiles	99	230
IPR005175	PPC_dom	CDD	103	209
IPR039605	AHL	PANTHER	8	294
IPR005175	PPC_dom	Pfam	104	209

No CAZYmes available for this sequence

External Links

No external refs found!