1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g02110.1

LOC_Os03g02110.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0001970 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001970_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g02110.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g02110.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_198
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_32


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 105 1059
IPR001680 WD40_rpt Pfam 229 262
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1141 1296
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 14 265
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 691 1062
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 6 214
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 280 501
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 215 279
IPR001680 WD40_rpt ProSiteProfiles 231 272
IPR001680 WD40_rpt ProSiteProfiles 1046 1060
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 335 654
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 695 1273
IPR001680 WD40_rpt SMART 224 263
IPR001680 WD40_rpt SMART 1233 1271
IPR001680 WD40_rpt SMART 554 594
IPR001680 WD40_rpt SMART 104 143
IPR001680 WD40_rpt SMART 761 810
IPR001680 WD40_rpt SMART 1159 1209
IPR001680 WD40_rpt SMART 282 319
IPR001680 WD40_rpt SMART 495 537
IPR001680 WD40_rpt SMART 1016 1059
IPR001680 WD40_rpt SMART 321 361
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 506 680

No CAZYmes available for this sequence

No external refs found!