LOC_Os03g02200.1

Description : Thymidine kinase

Gene families : OG_01_0011257 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011257_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g02200.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g02200.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_363
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_159

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004797	thymidine kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019136	deoxynucleoside kinase activity	None	Extended
MF	GO:0019205	nucleobase-containing compound kinase activity	None	Extended
MF	GO:0019206	nucleoside kinase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020633	Thymidine_kinase_CS	ProSitePatterns	238	251
IPR027417	P-loop_NTPase	Gene3D	67	211
IPR001267	Thymidine_kinase	PANTHER	67	270
IPR001267	Thymidine_kinase	Pfam	73	251
IPR027417	P-loop_NTPase	SUPERFAMILY	73	212

No CAZYmes available for this sequence

External Links

No external refs found!