1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g04520.2

LOC_Os03g04520.2


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0001513 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001513_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g04520.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g04520.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_129


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom SMART 587 658
IPR000504 RRM_dom SMART 475 554
IPR035979 RBD_domain_sf SUPERFAMILY 472 663
IPR000504 RRM_dom Pfam 515 551
IPR035979 RBD_domain_sf SUPERFAMILY 683 960
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 686 770
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 850 962
IPR000504 RRM_dom ProSiteProfiles 474 558
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 570 635
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 474 653

No CAZYmes available for this sequence

No external refs found!