LOC_Os03g05020.1

Description : transcription activators

Gene families : OG_01_0003702 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003702_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g05020.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g05020.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_269
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_218

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	ISM	GOs from InterProScan
MF	GO:0031267	small GTPase binding	ISM	GOs from InterProScan
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008081	Cytoplasmic_FMR1-int	Pfam	297	1143
IPR009828	CYRIA/CYRIB_Rac1-bd	Pfam	59	210
IPR008081	Cytoplasmic_FMR1-int	PRINTS	593	615
IPR008081	Cytoplasmic_FMR1-int	PRINTS	651	681
IPR008081	Cytoplasmic_FMR1-int	PRINTS	526	544
IPR008081	Cytoplasmic_FMR1-int	PRINTS	341	359
IPR008081	Cytoplasmic_FMR1-int	PRINTS	1037	1053
IPR008081	Cytoplasmic_FMR1-int	PIRSF	275	1184
IPR008081	Cytoplasmic_FMR1-int	PIRSF	1	279
IPR008081	Cytoplasmic_FMR1-int	PANTHER	275	1156
IPR008081	Cytoplasmic_FMR1-int	PANTHER	11	275

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os03g05020.1

Expression Profile

Co-expression Networks

Functional Annotation