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  5. LOC_Os03g05560.1

LOC_Os03g05560.1


Description : RING/U-box superfamily protein


Gene families : OG_01_0020415 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020415_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g05560.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g05560.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152


Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
MF GO:0016740 transferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING ProSiteProfiles 128 170
IPR001841 Znf_RING Pfam 127 170
IPR001841 Znf_RING SMART 128 169
IPR044600 ATL1/ATL16-like PANTHER 3 309
IPR013083 Znf_RING/FYVE/PHD Gene3D 85 175

No CAZYmes available for this sequence

No external refs found!