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  5. LOC_Os03g06139.1

LOC_Os03g06139.1


Description : ABC-2 type transporter family protein


Gene families : OG_01_0010015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010015_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g06139.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g06139.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_346
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_177


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027417 P-loop_NTPase Gene3D 174 412
IPR013525 ABC2_TM Pfam 516 725
IPR003439 ABC_transporter-like_ATP-bd Pfam 195 346
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 175 418
IPR027417 P-loop_NTPase SUPERFAMILY 189 410
IPR017871 ABC_transporter-like_CS ProSitePatterns 318 332
IPR003593 AAA+_ATPase SMART 203 395

No CAZYmes available for this sequence

No external refs found!