LOC_Os03g06160.1

Description : potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein

Gene families : OG_01_0001936 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001936_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g06160.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g06160.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_728

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0051259	protein complex oligomerization	None	Extended
BP	GO:0051260	protein homooligomerization	ISM	GOs from InterProScan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003131	T1-type_BTB	Pfam	13	100
IPR001646	5peptide_repeat	Pfam	241	279
IPR001646	5peptide_repeat	Pfam	137	174
IPR001646	5peptide_repeat	Pfam	186	225
IPR000210	BTB/POZ_dom	SMART	11	113
IPR011333	SKP1/BTB/POZ_sf	Gene3D	5	114
IPR011333	SKP1/BTB/POZ_sf	SUPERFAMILY	11	109

No CAZYmes available for this sequence

External Links

No external refs found!