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  5. LOC_Os03g10350.2

LOC_Os03g10350.2


Description : no pollen germination related 1


Gene families : OG_01_0007452 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007452_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g10350.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g10350.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_389
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_71


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat ProSiteProfiles 677 710
IPR011990 TPR-like_helical_dom_sf Gene3D 558 712
IPR011990 TPR-like_helical_dom_sf Gene3D 270 557
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 431 709
IPR019734 TPR_repeat Pfam 678 707
IPR019734 TPR_repeat SMART 142 175
IPR019734 TPR_repeat SMART 607 640
IPR019734 TPR_repeat SMART 326 359
IPR019734 TPR_repeat SMART 573 606
IPR019734 TPR_repeat SMART 677 710
IPR019734 TPR_repeat SMART 520 553
IPR019734 TPR_repeat SMART 484 517
IPR043376 NPG1-like PANTHER 5 715
IPR011990 TPR-like_helical_dom_sf Gene3D 48 269
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 205 477

No CAZYmes available for this sequence

No external refs found!