LOC_Os03g10478.1


Description : Glycosyl hydrolase family 10 protein


Gene families : OG_01_0015269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015269_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g10478.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g10478.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_179
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_108


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR001000 GH10_dom ProSiteProfiles 222 520
IPR001000 GH10_dom SMART 268 520
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 219 526
IPR008979 Galactose-bd-like_sf SUPERFAMILY 52 187
IPR001000 GH10_dom Pfam 231 491
IPR044846 GH10 PANTHER 8 577
IPR003305 CenC_carb-bd Pfam 54 172
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM22 131 580 1.4e-20 55 172
GH10 303 580 2e-55 232 497
No external refs found!