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  5. LOC_Os03g11440.1

LOC_Os03g11440.1


Description : SecY protein transport family protein


Gene families : OG_01_0004674 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004674_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g11440.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g11440.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_315
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_199


Type GO Term Name Evidence Source
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002208 SecY/SEC61-alpha Pfam 77 458
IPR030659 SecY_CS ProSitePatterns 77 96
IPR002208 SecY/SEC61-alpha TIGRFAM 31 466
IPR023201 SecY_dom_sf SUPERFAMILY 10 465
IPR019561 Translocon_Sec61/SecY_plug_dom Pfam 42 76
IPR002208 SecY/SEC61-alpha PIRSF 8 470
IPR002208 SecY/SEC61-alpha PANTHER 1 475
IPR023201 SecY_dom_sf Gene3D 9 473

No CAZYmes available for this sequence

No external refs found!