LOC_Os03g11960.1

Description : copper/zinc superoxide dismutase 3

Gene families : OG_01_0010682 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010682_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g11960.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g11960.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_160

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006801	superoxide metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018152	SOD_Cu/Zn_BS	ProSitePatterns	147	158
IPR036423	SOD-like_Cu/Zn_dom_sf	SUPERFAMILY	19	160
IPR036423	SOD-like_Cu/Zn_dom_sf	Gene3D	8	163
IPR024134	SOD_Cu/Zn_/chaperone	PANTHER	1	164
IPR001424	SOD_Cu_Zn_dom	CDD	17	155
IPR001424	SOD_Cu_Zn_dom	Pfam	23	158
IPR001424	SOD_Cu_Zn_dom	PRINTS	108	130
IPR001424	SOD_Cu_Zn_dom	PRINTS	133	159
IPR001424	SOD_Cu_Zn_dom	PRINTS	89	98
IPR001424	SOD_Cu_Zn_dom	PRINTS	53	75

No CAZYmes available for this sequence

External Links

No external refs found!