LOC_Os03g12530.1

Description : Cation efflux family protein

Gene families : OG_01_0010013 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010013_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g12530.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g12530.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_53
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_54

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036837	Cation_efflux_CTD_sf	Gene3D	304	394
IPR027469	Cation_efflux_TMD_sf	Gene3D	102	296
IPR036837	Cation_efflux_CTD_sf	SUPERFAMILY	300	377
IPR027470	Cation_efflux_CTD	Pfam	303	377
IPR002524	Cation_efflux	Pfam	105	297
IPR027469	Cation_efflux_TMD_sf	SUPERFAMILY	96	298
IPR002524	Cation_efflux	TIGRFAM	102	377

No CAZYmes available for this sequence

External Links

No external refs found!