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  5. LOC_Os03g13070.1

LOC_Os03g13070.1


Description : thaumatin-like protein 3


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g13070.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g13070.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_176


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin ProSiteProfiles 29 261
IPR037176 Osmotin/thaumatin-like_sf Gene3D 30 261
IPR001938 Thaumatin SMART 32 261
IPR001938 Thaumatin PRINTS 92 121
IPR001938 Thaumatin PRINTS 79 90
IPR001938 Thaumatin PRINTS 129 145
IPR001938 Thaumatin PRINTS 31 43
IPR001938 Thaumatin PIRSF 1 265
IPR001938 Thaumatin Pfam 36 261
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 31 261
IPR001938 Thaumatin PANTHER 14 263
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 266 3.4e-85 36 261
No external refs found!