LOC_Os03g13100.1

Description : RING/U-box superfamily protein

Gene families : OG_01_0011217 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011217_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g13100.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g13100.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_370
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_29

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044066	TRIAD_supradom	ProSiteProfiles	133	347
IPR031127	E3_UB_ligase_RBR	PANTHER	20	534
IPR013083	Znf_RING/FYVE/PHD	Gene3D	130	222
IPR001841	Znf_RING	ProSiteProfiles	137	185
IPR002867	IBR_dom	SMART	278	343
IPR002867	IBR_dom	SMART	208	270
IPR002867	IBR_dom	Pfam	208	270
IPR045840	Ariadne	Pfam	348	611

No CAZYmes available for this sequence

External Links

No external refs found!