LOC_Os03g13960.2

No description available

Gene families : OG_01_0006813 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006813_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g13960.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g13960.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_180

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016073	snRNA metabolic process	None	Extended
BP	GO:0016180	snRNA processing	ISM	GOs from InterProScan
CC	GO:0032039	integrator complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001279	Metallo-B-lactamas	Pfam	106	263
IPR036866	RibonucZ/Hydroxyglut_hydro	Gene3D	36	405
IPR027074	Integrator_9su	PANTHER	39	393
IPR036866	RibonucZ/Hydroxyglut_hydro	SUPERFAMILY	38	392

No CAZYmes available for this sequence

External Links

No external refs found!