LOC_Os03g15020.1

Description : beta-galactosidase 8

Gene families : OG_01_0009664 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009664_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g15020.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g15020.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	ISM	GOs from InterProScan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR031330	Gly_Hdrlase_35_cat	Pfam	138	442
IPR000922	Lectin_gal-bd_dom	ProSiteProfiles	870	956
IPR001944	Glycoside_Hdrlase_35	PANTHER	116	950
IPR001944	Glycoside_Hdrlase_35	PRINTS	759	775
IPR001944	Glycoside_Hdrlase_35	PRINTS	217	236
IPR001944	Glycoside_Hdrlase_35	PRINTS	410	426
IPR001944	Glycoside_Hdrlase_35	PRINTS	141	158
IPR001944	Glycoside_Hdrlase_35	PRINTS	390	405
IPR001944	Glycoside_Hdrlase_35	PRINTS	162	180
IPR001944	Glycoside_Hdrlase_35	PRINTS	353	368
IPR001944	Glycoside_Hdrlase_35	PRINTS	732	746
IPR001944	Glycoside_Hdrlase_35	PRINTS	274	289
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	131	447
IPR041392	GHD	Pfam	450	522
IPR043159	Lectin_gal-bd_sf	Gene3D	861	956
IPR000922	Lectin_gal-bd_dom	Pfam	878	955
IPR019801	Glyco_hydro_35_CS	ProSitePatterns	276	288
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	698	865
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	506	686

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH35	307	957	4.6e-120	139	441

External Links

No external refs found!