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  5. LOC_Os03g15590.1

LOC_Os03g15590.1


Description : novel cap-binding protein


Gene families : OG_01_0014936 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014936_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g15590.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g15590.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_275
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_71


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006413 translational initiation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001040 TIF_eIF_4E PANTHER 32 227
IPR019770 TIF_eIF_4E_CS ProSitePatterns 105 128
IPR023398 TIF_eIF4e-like SUPERFAMILY 24 223
IPR023398 TIF_eIF4e-like Gene3D 21 220
IPR001040 TIF_eIF_4E Pfam 50 207

No CAZYmes available for this sequence

No external refs found!