LOC_Os03g15940.1

Description : GATA type zinc finger transcription factor family protein

Gene families : OG_01_0004765 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004765_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g15940.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g15940.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_190
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001781	Znf_LIM	SMART	8	60
IPR001781	Znf_LIM	SMART	107	159
IPR001781	Znf_LIM	ProSitePatterns	9	43
IPR001781	Znf_LIM	ProSiteProfiles	106	166
IPR001781	Znf_LIM	ProSiteProfiles	7	67
IPR001781	Znf_LIM	Pfam	108	163
IPR001781	Znf_LIM	Pfam	9	64

No CAZYmes available for this sequence

External Links

No external refs found!