LOC_Os03g16900.1

Description : GDP dissociation inhibitor family protein / Rab GTPase activator family protein

Gene families : OG_01_0000813 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000813_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g16900.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g16900.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_79
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_4

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	ISM	GOs from InterProScan
MF	GO:0005093	Rab GDP-dissociation inhibitor activity	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	ISM	GOs from InterProScan
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036188	FAD/NAD-bd_sf	SUPERFAMILY	1	288
IPR018203	GDP_dissociation_inhibitor	Pfam	1	433
IPR018203	GDP_dissociation_inhibitor	PRINTS	24	41
IPR018203	GDP_dissociation_inhibitor	PRINTS	6	24
IPR018203	GDP_dissociation_inhibitor	PRINTS	212	229
IPR018203	GDP_dissociation_inhibitor	PRINTS	86	102
IPR018203	GDP_dissociation_inhibitor	PRINTS	230	251
IPR018203	GDP_dissociation_inhibitor	PRINTS	69	86
IPR018203	GDP_dissociation_inhibitor	PRINTS	135	150
IPR018203	GDP_dissociation_inhibitor	PANTHER	1	444
IPR036188	FAD/NAD-bd_sf	Gene3D	2	430
IPR000806	RabGDI	PRINTS	125	140
IPR000806	RabGDI	PRINTS	402	422
IPR000806	RabGDI	PRINTS	381	400
IPR000806	RabGDI	PRINTS	75	88
IPR000806	RabGDI	PRINTS	323	339
IPR000806	RabGDI	PRINTS	348	366
IPR000806	RabGDI	PRINTS	16	28
IPR000806	RabGDI	PRINTS	182	196
IPR000806	RabGDI	PRINTS	280	294
IPR036188	FAD/NAD-bd_sf	SUPERFAMILY	390	433

No CAZYmes available for this sequence

External Links

No external refs found!