LOC_Os03g17350.1


Description : ABC-2 type transporter family protein


Gene families : OG_01_0002914 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002914_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g17350.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g17350.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_163
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_142


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR017871 ABC_transporter-like_CS ProSitePatterns 282 296
IPR003593 AAA+_ATPase SMART 167 359
IPR013525 ABC2_TM Pfam 484 691
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 121 382
IPR027417 P-loop_NTPase SUPERFAMILY 155 370
IPR027417 P-loop_NTPase Gene3D 150 371
IPR043926 ABCG_dom Pfam 339 416
IPR003439 ABC_transporter-like_ATP-bd Pfam 158 310

No CAZYmes available for this sequence

No external refs found!