LOC_Os03g18360.1

Description : tetratricopeptide repeat (TPR)-containing protein

Gene families : OG_01_0015669 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015669_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g18360.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g18360.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_154
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0010104	regulation of ethylene-activated signaling pathway	None	Extended
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	ISM	GOs from InterProScan
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070297	regulation of phosphorelay signal transduction system	None	Extended
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902532	negative regulation of intracellular signal transduction	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044631	ETO1-like	PANTHER	1	955
IPR011990	TPR-like_helical_dom_sf	Gene3D	406	617
IPR019734	TPR_repeat	Pfam	779	807
IPR011333	SKP1/BTB/POZ_sf	Gene3D	237	386
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	535	901
IPR019734	TPR_repeat	SMART	907	940
IPR019734	TPR_repeat	SMART	778	811
IPR019734	TPR_repeat	SMART	578	611
IPR019734	TPR_repeat	SMART	704	737
IPR019734	TPR_repeat	ProSiteProfiles	778	811
IPR000210	BTB/POZ_dom	SMART	248	348
IPR011990	TPR-like_helical_dom_sf	Gene3D	852	958
IPR011990	TPR-like_helical_dom_sf	Gene3D	654	851
IPR011333	SKP1/BTB/POZ_sf	SUPERFAMILY	248	344

No CAZYmes available for this sequence

External Links

No external refs found!