LOC_Os03g18510.1

Description : Eukaryotic translation initiation factor 2 subunit 1

Gene families : OG_01_0008392 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008392_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g18510.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g18510.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_164
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_229

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024054	TIF2_asu_middle_sf	SUPERFAMILY	90	195
IPR003029	S1_domain	Pfam	15	88
IPR003029	S1_domain	ProSiteProfiles	17	88
IPR024055	TIF2_asu_C	Gene3D	201	323
IPR011488	TIF_2_asu	Pfam	126	256
IPR024054	TIF2_asu_middle_sf	Gene3D	91	175
IPR011488	TIF_2_asu	PANTHER	1	339
IPR012340	NA-bd_OB-fold	SUPERFAMILY	13	93
IPR024055	TIF2_asu_C	SUPERFAMILY	199	315
IPR044126	S1_IF2_alpha	CDD	14	89

No CAZYmes available for this sequence

External Links

No external refs found!