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  5. LOC_Os03g18840.1

LOC_Os03g18840.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005628 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005628_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g18840.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g18840.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_30


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 198 240
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 14 246
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 12 316
IPR001680 WD40_rpt ProSiteProfiles 14 35
IPR007148 SSU_processome_Utp12 Pfam 492 582
IPR001680 WD40_rpt Pfam 193 231
IPR001680 WD40_rpt Pfam 12 35
IPR001680 WD40_rpt SMART 151 188
IPR001680 WD40_rpt SMART 1 35
IPR001680 WD40_rpt SMART 109 148
IPR001680 WD40_rpt SMART 191 231

No CAZYmes available for this sequence

No external refs found!