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  5. LOC_Os03g19480.1

LOC_Os03g19480.1


Description : SET domain-containing protein


Gene families : OG_01_0001658 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001658_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g19480.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g19480.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_329
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_186


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006338 chromatin remodeling ISM GOs from InterProScan
MF GO:0018024 obsolete histone lysine N-methyltransferase activity ISM GOs from InterProScan
CC GO:0031519 PcG protein complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001005 SANT/Myb CDD 532 575
IPR026489 CXC_dom ProSiteProfiles 628 732
IPR025778 Hist-Lys_N-MeTrfase_plant ProSiteProfiles 1 895
IPR033467 Tesmin/TSO1-like_CXC SMART 681 718
IPR001214 SET_dom Pfam 758 861
IPR001214 SET_dom ProSiteProfiles 747 862
IPR001214 SET_dom SMART 747 868
IPR041355 Pre-SET_CXC Pfam 685 716
IPR045318 EZH1/2-like PANTHER 7 894

No CAZYmes available for this sequence

No external refs found!